Bake Out

Bake Out

  Note: This procedure should be done every three weeks and ideally for 48 hours minimum.

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Stop the current collection in SerialEM.

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Save the Navigator and Log file of the current run.

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Close SerialEM.

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Put the Grating grid onto the stage using the Cryospectporter window and the command “Load”.

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Remove all Cartridges from the Sample Storage.

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Switch off Emission by hovering over “Emission” in the TEM center microscope pictogram and click in the line Auto Emission “OFF”

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Wait until emission reached 0 uA.

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Switch off High Tension by clicking “HT” in the TEM center microscope pictogram and click in the line for HT on “OFF”.

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Wait until you reached 0 kv high tension

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In the TEM center open the window “LN2 Auto Refill Maintenance”.

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Click on “Heater Controller”.

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In the new window select the finish date and time (normally Monday morning, 7 am).

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Ensure that the Cooling time is set to 8 hours.

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Ensure that the all targets are selected (i.e. Column, Sample Storage and Stage).

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Click in the section “Bake Out operation” on “Start”.

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In the pop_up window confirm with “Yes”.

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The bakeout will last until the selected time

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In Digital Micrograph select in the menu bar “Camera –> Temperature” (Power User mode must be enabled).

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In the confirmation window select “Yes”.

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In the next window select a target temperature of 50 degrees celsius. Click “OK”.

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In the next window click on “Options…”.

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Select a Heating duration of 8 hours and a Start delay of 1 hour.

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Confirm with “Ok”.

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Click on “Start” to run the heating cycle of the camera.